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Searching for "The Gene Ontology Categorizer." – sorted by Relevance.

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10 documents found, showing 1 through 10.

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Summary: The Gene Ontology Categorizer, developed jointly
by Cliff A. Joslyn, Susan M. Mniszewski, Andy Fulmer, Gary Heaton — 2004
…BIOINFORMATICS The Gene Ontology Categorizer Vol. 20 Suppl. 1 2004, pages i169–i177 DOI: 10…
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Protein annotation as term categorization in the gene ontology using word proximity networks
by Karin Verspoor, Judith Cohn, Cliff Joslyn, Sue Mniszewski, Andreas Rechtsteiner, Luis M. Rocha, Tiago Simas — 2005 — Suppl 1:S20
…Protein Annotation as Term Categorization in the Gene Ontology Karin Verspoor, Judith Cohn, Cliff…
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Poset Ontologies and Concept Lattices as Semantic Hierarchies
by Cliff Joslyn — 2004 — Conceptual Structures at Work, Lecture Notes in Artificial Intelligence 2004
… such as the Gene Ontology (GO) [6]. Our approach depends on casting the GO as a labeled partially ordered set…
Cited by 5 (3 self) – Add To MetaCart

Categorization Approach to Automated Ontological Function Annotation
by Karin Verspoor, Judith Cohn, Susan Mniszewski, Cliff Joslyn — 2006 — Protein Science
…(Cover page) Title: A Categorization Approach to Automated Ontological Function Annotation Authors…
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T-profiler: scoring the activity of predefined groups of genes using gene expression data
by André Boorsma, Barrett C. Foat, Daniel Vis, Frans Klis, Harmen J. Bussemaker — 2005 — Nucleic Acids Res
… in the average activity of predefined groups of genes. The gene groups are defined based on Gene Ontology…
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Predicting gene functions from text using a cross-species approach
by Emilia Stoica, Marti Hearst, Emilia Stoica, Marti Hearst — 2006 — In Proc. Eleventh Pacific Symposium on Biocomputing (PSB
… are assigned to genes using a Gene Ontology Categorizer which utilizes the structure of the Gene Ontology…
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Automatic medical encoding with SNOMED categories
by Patrick Ruch, Julien Gobeill, Christian Lovis, Antoine Geissbühler, Antoine Geissbühler — 2008
… in molecular biology using the Gene Ontology, as well as for extraction GeneRiFs in ENTREZ-Gene [2]. The Gene…
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Serum Response Factor: Master Regulator of the Actin Cytoskeleton and Contractile Apparatus
by Joseph M. Miano, Xiaochun Long, Keigi Fujiwara, Corresponding Joseph M. Miano
… Ontology categorization of each CArG element’s associated gene revealed nearly half to be associated…
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Iowa State University
by Jing Ding, Julie Dickerson, Sigurdur Olafsson, Jing Ding
… tended to have higher counts than the more specific ones. 3 The Gene Ontology Categorizer [32] took…
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BMC Molecular Biology BioMed Central
by Barbara Birkaya, Kori Ortt, Satrajit Sinha — 2007
…. Functional classification of these potential targets based on Gene Ontology categorization revealed…
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