Searching for "Shotgun Sequence Assembly." – sorted by Relevance.
27 documents found, showing 1 through 10.
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AMASS: A Structured Pattern Matching Approach to Shotgun Sequence Assembly
- …AMASS: A Structured Pattern Matching Approach to Shotgun Sequence Assembly Sun Kim…
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A Computational Approach to Sequence Assembly Validation
- … misassembled regions in shotgun sequence assemblies. Our approach consists of seven distinct analyses…
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A Probabilistic Approach to Sequence Assembly Validation
- … probabilistic approach to identify possible misassembled regions in shotgun sequence assemblies. Based…
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A comparison of DNA fragment assembly algorithms
- … on sequencing new genomes, the problem of DNA fragment assembly for shotgun sequencing is growing in importance…
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Metaheuristics for the DNA Fragment Assembly Problem
- … research centers embark on sequencing new genomes, the problem of DNA fragment assembly for shotgun…
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SST: An algorithm for searching sequence databases in time proportional to the logarithm
- … degree of similarity to the query sequence, such as assembling shotgun sequences or matching ESTs…
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SST: An algorithm for searching sequence databases in time proportional to the logarithm
- … it to detecting overlapping fragments in shotgun sequence assembly. We fragment a 1.5 megabase sequence of genomic…
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A Case Study in Genome-Level Fragment Assembly
- …@(email omitted); and skiena@(email omitted);. Introduction The problem of fragment assembly for shotgun sequencing is growing…
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PROJECT SUMMARY 1
- … reasonable and tractable genome size and GC composition for whole genome shotgun sequencing and assembly…
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Whole-genome sequencing and assembly with highthroughput, short read technologies
- … with the standard shotgun sequencing protocol. We present SHRAP (SHort Read Assembly Protocol), a sequencing…
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