Searching for "MODBASE" – sorted by Relevance.

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18 documents found, showing 1 through 10. Next 10 →

MODBASE: a database of annotated comparative protein structure models and associated resources
by Ursula Pieper, Narayanan Eswar, Fred P. Davis, Hannes Braberg, M. S. Madhusudhan, Andrea Rossi, Marc Marti-renom, Rachel Karchin, Ben M. Webb, David Eramian, Min-yi Shen, Libusha Kelly, Francisco Melo, Andrej Sali — 2004 — Nucleic Acids Res
…MODBASE: a database of annotated comparative protein structure models and associated resources…
Cited by 35 (6 self) – Add To MetaCart

• Summary and Conclusions
by Daniel E. Rivera, Martin W. Braun — 2002
…-on-Demand (MoD) Estimation Overview • Two application/development areas: – MoD-based adaptive frequency response…
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Applying Movement Oriented Design to Create Educational Stories
by Nalin Sharda
… of any MOD-based presentation is a Movement, which is a micro story with its own Begin, Middle and End…
Cited by 1 (1 self) – Add To MetaCart

Protein complex compositions predicted by structural similarity. Nucleic Acids Res. 34: 2943–2952. doi: 10.1093/nar/ gkl353
by Fred P. Davis, Hannes Braberg, Min-yi Shen, Ursula Pieper, Andrej Sali, M. S. Madhusudhan — 2006 — Nucl. Acids Res
… that are not present in template complexes. Through integration with MODBASE, the application of the method…
Cited by 2 (0 self) – Add To MetaCart

High-throughput computational and experimental techniques in structural genomics
by J. Eduardo, Email Alerting, Mark R. Chance, Mark R. Chance, Andras Fiser, Andras Fiser, Andrej Sali, Andrej Sali, Ursula Pieper, Ursula Pieper, Narayanan Eswar, Narayanan Eswar, Guiping Xu, Guiping Xu, J. Eduardo Fajardo, Thirumuruhan Radhakannan, Thirumuruhan Radhakannan, Nebojsa Marinkovic, Nebojsa Marinkovic — 2004 — Genome Res
… MODBASE, a comprehensive database of comparative protein-structure models, where the computational model…
Cited by 7 (3 self) – Add To MetaCart

Protein structure prediction and structural genomics
by David Baker, Andrej Sali — 2001 — Science
… database of comparative models, ModBase (32–34). The Web interface to the database allows flexible querying…
Cited by 71 (3 self) – Add To MetaCart

New developments in the interpro database
by Nicola J. Mulder, Rolf Apweiler, Teresa K. Attwood, Amos Bairoch, Alex Bateman, David Binns, Peer Bork, Virginie Buillard, Lorenzo Cerutti, Richard Copley, Emmanuel Courcelle, Ujjwal Das, Louise Daugherty, Mark Dibley, Robert Finn, Wolfgang Fleischmann, Julian Gough, Daniel Haft, Nicolas Hulo, Sarah Hunter, Daniel Kahn, Er Kanapin, Anish Kejariwal, Alberto Labarga, Petra S. Langendijk-genevaux, David Lonsdale, Rodrigo Lopez, Ivica Letunic, Martin Madera, John Maslen, Craig Mcanulla, Jennifer Mcdowall, Jaina Mistry, Alex Mitchell, Anastasia N. Nikolskaya, Ra Orchard, Christine Orengo, Robert Petryszak, Jeremy D. Selengut, Christian J. A. Sigrist, Paul D. Thomas, Franck Valentin, Derek Wilson, Cathy H. Wu, Corin Yeats — 2007 — Nucl Acids Res
…. Proteins with 3D structures modelled by MODBASE (17) and SWISS-MODEL (18) have links to the structure…
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CAD-Based Creation and Optimization of a Gas Turbine Flowpath Module with Multiple Parameterizations
by Damon Delap, Jeff Hogge, C. Greg Jensen — 2003
… mapping and translation capabilities. The two parameterizations we will discuss are mod-based and row…
Cited by 1 (0 self) – Add To MetaCart

BMC Systems Biology BioMed Central
by Karthik Raman, Kalidas Yeturu, Nagasuma Ch, Nagasuma Chandra — 2008
… (2005) [21] (MAP) Sassetti et al (2003) [23] (TraSH) ModBase [25] Gao et al (2005) [30] (Gao…
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MolIDE: a homology modeling framework you can click with
by Adrian A. Canutescu, L. Dunbrack — 2005
… increase. There are databases of models available, such as MODBASE (Pieper et al., 2002), as well…
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