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Searching for authors named "Emily Rocke" – sorted by Relevance.

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  • On finding novel gapped motifs in DNA sequences  
  • by Emily Rocke — 1998 — In RECOMB98: Proceedings of the Second Annual International Conference on Computational Molecular Biology
  • …this paper I will describe the concept and implementation of an algorithm for finding motifs in DNA sequences, on which Martin Tompa and I have been working for approximately a year (see also [5]). This section will briefly describe the project concept as it existed when I began work on the project.…
  • Cited by 14 (4 self)Add To MetaCart
  • Using Suffix Trees for Gapped Motif Discovery  
  • by Emily Rocke — 2000 — In Proceedings of the 11th Annual Symposium on Combinatorial Pattern Matching
  • …Gibbs sampling is a local search method that can be used to find novel motifs in a text string. In previous work [8], we have proposed a modified Gibbs sampler that can discover novel gapped motifs of varying lengths and occurrence rates in DNA or protein sequences. The Gibbs sampling method require…
  • Cited by 6 (0 self)Add To MetaCart
  • Characterizing History Independent Data Structures  
  • by Jason Hartline, Edwin Hong, Alexander Mohr, Er E. Mohr, William Pentney, Emily Rocke — 2002
  • …We consider history independent data structures as proposed for study by Teague and Naor [2]. In a history independent data structure, nothing can be learned from the representation of the data structure except for what is available from the abstract data structure. We show that for the most par…
  • Cited by 11 (0 self)Add To MetaCart
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