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combining text-mining and

by Mate ́ Ongenaert, Er Van Neste, Tim De Meyer, Gerben Menschaert, Sofie Bekaert, Wim Van Criekinge , 2007
"... PubMeth: a cancer methylation database ..."
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PubMeth: a cancer methylation database

PubMeth: a cancer methylation database combining text-mining and expert annotation

by Maté Ongenaert, Er Van Neste, Tim De Meyer, Gerben Menschaert, Sofie Bekaert, Wim Van Criekinge - Nucleic Acids Res , 2008
"... expert annotation ..."
Abstract - Cited by 24 (1 self) - Add to MetaCart
expert annotation

Gene selection for cancer classification using support vector machines

by Isabelle Guyon, Jason Weston, Stephen Barnhill, Vladimir Vapnik, Nello Cristianini - Machine Learning
"... Abstract. DNA micro-arrays now permit scientists to screen thousands of genes simultaneously and determine whether those genes are active, hyperactive or silent in normal or cancerous tissue. Because these new micro-array devices generate bewildering amounts of raw data, new analytical methods must ..."
Abstract - Cited by 1115 (24 self) - Add to MetaCart
better and more compact gene subsets. In patients with leukemia our method discovered 2 genes that yield zero leaveone-out error, while 64 genes are necessary for the baseline method to get the best result (one leave-one-out error). In the colon cancer database, using only 4 genes our method is 98

High sensitivity mapping of methylated cytosines

by Susan J. Clark, Janet Harrison, Cheryl L. Paul, Marianne Frommer - Nucl. Acids Res , 1994
"... An understanding of DNA methylation and its potential role in gene control during development, aging and cancer has been hampered by a lack of sensitive methods which can resolve exact methylation patterns from only small quantities of DNA. We have now developed a genomic sequencing technique which ..."
Abstract - Cited by 222 (4 self) - Add to MetaCart
An understanding of DNA methylation and its potential role in gene control during development, aging and cancer has been hampered by a lack of sensitive methods which can resolve exact methylation patterns from only small quantities of DNA. We have now developed a genomic sequencing technique which

MethyCancer: the database of human DNA

by Ximiao He, Suhua Chang, Jiajie Zhang, Qian Zhao, Haizhen Xiang, Kanthida Kusonmano, Liu Yang, Zhong Sheng Sun, Huanming Yang, Jing Wang , 2007
"... methylation and cancer ..."
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methylation and cancer

Edgar: Extraction of drugs, genes and relations from the biomedical literature

by Thomas C. Rindflesch, Lorraine Tanabe, John N. Weinstein, Lawrence Hunter , 2000
"... EDGAR (Extraction of Drugs, Genes and Relations) is a natural language processing system that extracts information about drugs and genes relevant to cancer from the biomedical literature. This automatically extracted information has remarkable potential to facilitate computational analysis in the mo ..."
Abstract - Cited by 179 (7 self) - Add to MetaCart
EDGAR (Extraction of Drugs, Genes and Relations) is a natural language processing system that extracts information about drugs and genes relevant to cancer from the biomedical literature. This automatically extracted information has remarkable potential to facilitate computational analysis

REBASE-a database for DNA restriction and modification: enzymes, genes and genomes

by Richard J. Roberts, Tamas Vincze, Janos Posfai, Dana Macelis - Nucleic Acids Res , 2009
"... REBASE is a comprehensive database of information about restriction enzymes, DNA methyltransferases and related proteins involved in the biological process of restriction–modification (R–M). It contains fully referenced information about recognition and cleavage sites, isoschizomers, neoschizomers, ..."
Abstract - Cited by 127 (12 self) - Add to MetaCart
, commercial availability, methylation sensitivity, crystal and sequence data. Experimentally characterized homing endonucleases are also included. The fastest growing segment of REBASE contains the putative R–M systems found in the sequence databases. Comprehensive descriptions of the R–M content of all fully

MethHC: a database of DNA methylation and gene expression in human cancer

by unknown authors , 2014
"... We present MethHC ..."
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We present MethHC

snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs

by Laurent Lestrade, Michel J. Weber - Nucleic Acids Res , 2006
"... The snoRNA-LBME-db is a dedicated database containing human C/D box and H/ACA box small nucleolar RNAs (snoRNAs), and small Cajal body-specific RNAs (scaRNAs). C/D box and H/ACA box snoRNAs are part of ribonucleoparticles that guide 20-O-ribose methylation and pseudouridilation, respectively, of sel ..."
Abstract - Cited by 124 (0 self) - Add to MetaCart
The snoRNA-LBME-db is a dedicated database containing human C/D box and H/ACA box small nucleolar RNAs (snoRNAs), and small Cajal body-specific RNAs (scaRNAs). C/D box and H/ACA box snoRNAs are part of ribonucleoparticles that guide 20-O-ribose methylation and pseudouridilation, respectively

DATABASE t

by unknown authors
"... all rs no av th lin-14 protein, lower levels of which are essential for nor- several types of cancers [4]. In cancer, miRNAs may ..."
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all rs no av th lin-14 protein, lower levels of which are essential for nor- several types of cancers [4]. In cancer, miRNAs may
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